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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs10515972 chr18:53107884 A/G NARS chr18:55267888-55289445:- 0.79 6.76 5.29E-11 Box Plot
BLCA rs10515972 chr18:53107884 A/G SMAD2 chr18:45335328-45457517:- 0.81 6.35 5.96E-10 Box Plot
BLCA rs10515972 chr18:53107884 A/G TXNL1 chr18:54264439-54318831:- 0.88 6.72 6.77E-11 Box Plot
BLCA rs10515972 chr18:53107884 A/G VPS4B chr18:61056423-61089716:- 0.64 6.03 3.89E-9 Box Plot
BLCA rs10519447 chr4:139026058 A/C TRPV1 chr17:3468738-3512705:- 0.28 5.97 5.52E-9 Box Plot
BLCA rs10521164 chr17:9963486 A/G MAP2K4 chr17:11924141-12047147:+ 0.7 6.12 2.26E-9 Box Plot
BLCA rs1052117 chr2:101186088 C/T LOC285359 chr3:101431278-101432259:+ 0.46 8.65 1.48E-16 Box Plot
BLCA rs1052432 chr5:176564189 G/A LOC388955 chr2:63849182-63850159:- -0.65 -12.9 7.36E-32 Box Plot
BLCA rs10525 chr7:33045396 A/T FKBP9L chr7:55748767-55780945:- 0.37 8.72 8.62E-17 Box Plot
BLCA rs10532946 chr22:23641881 TTATATATATA/T LOC644165 chr22:25028882-25049326:+ -0.57 -9.05 7.08E-18 Box Plot
BLCA rs10532946 chr22:23641881 TTATATATATA/T POM121L10P chr22:25053448-25054732:- -0.43 -6.53 2.12E-10 Box Plot
BLCA rs10555631 chr2:101182673 CATT/C LOC285359 chr3:101431278-101432259:+ 0.47 9.22 2.03E-18 Box Plot
BLCA rs10556555 chr14:39844313 TAGTA/T LOC647288 chr13:75811890-75814517:- -0.41 -6.63 1.11E-10 Box Plot
BLCA rs10563042 chr22:23647300 TAAA/T POM121L10P chr22:25053448-25054732:- 0.69 13.45 4.6E-34 Box Plot
BLCA rs10563354 chr11:109617795 CTT/C KRTAP13-1 chr21:31768392-31769140:+ 0.15 6.51 2.37E-10 Box Plot